Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007396.1 Corchorus capsularis cultivar CVL-1 contig07417, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27170

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2067--2104
18
2.1
18
90
9
60
23
0
10
65
1.23
2135--2184
20
2.4
21
80
6
66
26
0
16
58
1.38
9785--9815
12
2.6
12
94
0
53
51
29
16
3
1.59
12781--12851
34
2.1
34
94
0
124
28
5
16
49
1.69
14143--14183
21
2.0
20
90
4
64
19
31
14
34
1.92
14196--14225
5
5.8
5
96
4
51
0
16
0
83
0.65
14835--14901
21
3.2
21
71
0
62
34
23
11
29
1.91
17175--17208
2
17.5
2
87
6
52
52
2
0
44
1.16
17874--19753
154
12.2
152
84
5
2241
42
18
16
22
1.89
17874--19753
307
6.1
306
85
4
2322
42
18
16
22
1.89
22801--22835
17
2.1
17
100
0
70
40
0
31
28
1.57

Tables:   1

The End!