Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007401.1 Corchorus capsularis cultivar CVL-1 contig07422, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35899

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--133
32
4.2
32
93
0
212
9
42
36
10
1.72
13460--13954
247
2.0
247
100
0
990
39
14
16
29
1.88
26565--26639
30
2.5
30
84
0
87
14
26
29
29
1.95
34613--34672
24
2.7
23
90
10
97
30
15
6
48
1.70
34943--35004
27
2.4
26
76
17
67
66
12
3
17
1.38

Tables:   1

The End!