Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007406.1 Corchorus capsularis cultivar CVL-1 contig07427, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21014

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1289--1314
10
2.6
10
100
0
52
23
7
19
50
1.73
2242--2351
40
2.8
40
87
2
152
24
18
10
46
1.81
3681--3713
10
3.3
10
91
0
57
60
39
0
0
0.97
4600--4630
2
15.5
2
100
0
62
48
0
51
0
1.00
6334--6388
22
2.5
22
96
0
101
30
12
21
34
1.91
7614--7665
26
1.9
28
92
7
90
36
26
19
17
1.94
13806--13849
22
2.0
22
82
8
54
43
9
4
43
1.56
17818--17890
13
5.3
13
70
22
51
39
1
5
53
1.33
18191--18226
19
1.9
18
88
5
54
41
2
22
33
1.68
19502--19535
16
2.2
16
89
5
52
29
2
8
58
1.43

Tables:   1

The End!