Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007408.1 Corchorus capsularis cultivar CVL-1 contig07429, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34626

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131--167
2
18.5
2
100
0
74
51
0
0
48
1.00
9360--9390
11
2.8
11
95
0
53
38
3
19
38
1.68
9370--9407
19
2.1
18
90
5
58
44
2
21
31
1.66
10758--10787
6
5.2
6
96
4
53
36
0
13
50
1.42
12263--12303
15
2.7
15
92
7
66
41
21
26
9
1.84
12808--12845
6
6.2
6
87
6
58
2
13
2
81
0.90
12808--12845
19
2.1
19
90
5
60
2
13
2
81
0.90
14151--14202
23
2.5
20
75
12
52
30
0
19
50
1.48
15308--15338
11
2.8
11
95
0
53
38
3
19
38
1.68
15318--15355
19
2.1
18
90
5
58
44
2
21
31
1.66
16706--16741
6
6.2
6
93
3
56
38
0
11
50
1.38
19308--19382
27
2.8
27
85
0
105
41
22
14
21
1.89
19567--19638
28
2.6
28
86
4
92
20
25
22
31
1.98
19984--20489
156
3.2
154
84
4
683
35
19
14
31
1.91
33496--33534
12
3.2
12
89
10
53
5
0
5
89
0.58

Tables:   1

The End!