Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007409.1 Corchorus capsularis cultivar CVL-1 contig07430, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31765

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
393--445
12
4.3
12
80
4
61
28
18
15
37
1.91
391--445
25
2.2
24
90
3
83
27
20
14
38
1.91
541--584
21
2.1
21
83
8
54
18
31
9
40
1.81
771--843
33
2.2
32
78
7
83
15
35
36
12
1.84
781--850
33
2.1
34
89
2
106
15
40
32
11
1.83
790--867
33
2.4
33
86
0
102
15
41
34
8
1.78
866--970
33
3.2
33
90
2
158
10
27
39
22
1.87
877--929
17
3.2
17
69
15
56
9
24
37
28
1.86
2503--2536
6
5.7
6
96
0
59
52
26
2
17
1.58
10040--10076
2
18.5
2
100
0
74
0
0
51
48
1.00
12732--12756
12
2.1
12
100
0
50
0
24
0
76
0.80
19884--19928
19
2.3
19
84
7
54
53
20
6
20
1.67
21535--21564
16
1.9
15
93
6
51
16
16
20
46
1.84

Tables:   1

The End!