Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007414.1 Corchorus capsularis cultivar CVL-1 contig07435, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15970

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
472--518
16
2.9
16
84
9
51
61
4
0
34
1.15
2771--2800
6
5.0
6
95
0
51
0
20
0
80
0.72
2805--2837
13
2.4
14
90
5
50
78
3
0
18
0.87
6936--6988
24
2.2
25
86
3
72
0
20
1
77
0.87
6955--6993
15
2.6
15
100
0
78
0
23
0
76
0.78
14183--14215
2
17.0
2
93
6
59
51
0
0
48
1.00
14462--14522
29
2.0
30
84
6
79
24
16
13
45
1.83
14673--14734
31
2.1
29
87
6
88
40
12
12
33
1.82
14778--14803
13
2.0
13
100
0
52
0
15
0
84
0.62
15286--15350
30
2.1
30
88
2
94
26
18
7
47
1.75
15908--15970
30
2.1
31
85
8
85
23
17
7
50
1.72

Tables:   1

The End!