Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007419.1 Corchorus capsularis cultivar CVL-1 contig07440, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12680

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2042--2080
21
1.9
21
94
5
71
30
35
28
5
1.79
4393--4656
134
2.0
134
95
0
474
29
15
30
25
1.95
5547--5594
25
1.9
25
95
0
87
20
16
22
39
1.92
6832--6932
33
3.1
33
88
2
132
12
29
39
17
1.87
7182--7254
5
13.6
5
77
16
58
75
1
21
1
0.96
11328--11460
67
2.0
67
90
0
212
31
5
24
38
1.78

Tables:   1

The End!