Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007421.1 Corchorus capsularis cultivar CVL-1 contig07442, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37858

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6158--6266
54
2.0
54
91
3
175
38
9
26
25
1.86
7882--7952
30
2.4
30
85
4
99
21
16
25
36
1.94
13291--13318
2
14.0
2
100
0
56
50
0
0
50
1.00
13621--13677
11
5.2
11
82
0
69
24
28
29
17
1.97
13627--13677
22
2.3
22
100
0
102
25
29
27
17
1.98
13723--13766
21
2.1
21
87
8
63
68
4
2
25
1.20
13933--13992
30
2.0
30
96
3
113
35
40
0
25
1.56
14875--14953
29
2.7
29
80
4
86
31
21
16
30
1.95
19404--19429
11
2.4
11
100
0
52
15
0
0
84
0.62
20467--20524
30
1.9
30
85
0
80
20
15
24
39
1.91
37540--37595
28
2.0
28
100
0
112
57
10
14
17
1.65
37718--37785
26
2.6
26
90
0
109
54
10
1
33
1.43

Tables:   1

The End!