Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007426.1 Corchorus capsularis cultivar CVL-1 contig07447, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13506

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4674--4757
32
2.9
28
81
14
107
51
14
10
23
1.73
5048--5103
18
3.2
18
83
11
64
53
3
0
42
1.18
5055--5164
56
1.9
57
85
7
152
49
4
0
45
1.29
9938--9985
23
2.1
23
92
0
78
47
12
6
33
1.66
11918--11973
17
3.4
16
71
14
51
26
21
1
50
1.59
11918--11989
16
4.2
16
72
22
58
26
23
1
48
1.59
12232--12258
14
1.9
14
100
0
54
22
18
7
51
1.70
12423--12487
32
2.0
32
93
0
112
20
18
3
58
1.52
12560--12672
38
3.0
37
83
5
145
25
16
7
50
1.70
12614--12730
58
2.0
58
100
0
234
27
13
5
53
1.60
12576--12766
96
2.0
96
87
4
278
27
14
6
52
1.65
12672--12825
76
2.0
76
97
0
290
25
15
6
51
1.67
12555--12806
134
1.9
134
94
0
450
26
15
6
51
1.67
12672--12815
38
3.8
38
86
7
211
26
15
6
52
1.66

Tables:   1

The End!