Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007427.1 Corchorus capsularis cultivar CVL-1 contig07448, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16583

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2604--2683
27
2.9
28
85
10
85
13
22
1
62
1.38
2686--2972
22
13.8
22
74
16
224
22
20
5
50
1.69
2737--2855
42
3.1
37
82
12
136
23
20
5
51
1.67
2719--2972
101
2.5
99
87
3
357
22
20
5
51
1.68
2851--3006
57
2.8
57
85
2
190
21
21
5
51
1.68
2927--3026
28
3.5
28
73
12
87
21
22
5
52
1.66
3177--3262
40
2.1
41
81
10
106
23
23
3
50
1.65
3250--3506
32
7.8
32
75
15
86
20
25
2
51
1.61
3210--3346
72
1.9
72
86
0
193
20
27
2
49
1.60
3302--3516
64
3.4
64
81
7
251
20
25
3
50
1.64
3438--3491
17
3.3
17
75
19
69
18
27
3
50
1.64
8155--8197
3
14.3
3
100
0
86
67
0
0
32
0.91
8979--9027
22
2.2
22
85
7
64
57
14
14
14
1.66
8985--9037
22
2.4
22
80
3
70
58
16
9
15
1.62

Tables:   1

The End!