Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007429.1 Corchorus capsularis cultivar CVL-1 contig07450, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22620

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
545--597
26
2.1
26
86
6
74
52
3
11
32
1.55
2273--2314
16
2.8
16
83
16
54
59
0
0
40
0.97
2274--2314
3
13.7
3
80
19
50
60
0
0
39
0.96
9329--9384
22
2.5
22
80
8
69
39
0
0
60
0.97
11599--11696
42
2.4
42
79
14
107
42
27
7
22
1.79
14140--14219
40
2.0
40
90
4
126
22
22
20
35
1.96
15077--15299
26
7.9
25
65
27
85
41
26
13
17
1.87
15075--15303
58
3.9
58
97
0
431
42
25
13
18
1.87
16129--16224
35
2.7
35
77
0
93
26
28
18
27
1.98
16573--16990
72
5.8
72
87
2
531
21
27
19
31
1.97
16578--16990
143
2.9
144
82
4
521
22
27
19
31
1.98
16580--16990
215
1.9
215
85
2
565
22
27
19
31
1.98
17644--17674
16
1.9
16
93
0
53
32
22
29
16
1.95

Tables:   1

The End!