Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000743.1 Corchorus capsularis cultivar CVL-1 contig00743, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13195

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
250--297
21
2.3
21
88
0
78
56
6
8
29
1.53
402--539
16
8.6
16
77
12
140
7
21
39
31
1.82
402--539
32
4.3
32
86
7
158
7
21
39
31
1.82
406--539
48
2.8
47
83
8
155
8
20
40
30
1.82
1610--1647
11
3.5
11
85
10
51
57
2
0
39
1.12
11162--11237
37
2.1
34
88
7
107
59
5
9
26
1.49

Tables:   1

The End!