Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007436.1 Corchorus capsularis cultivar CVL-1 contig07457, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15489

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1931--2002
26
2.8
26
80
2
92
41
26
13
18
1.87
2811--2870
3
20.3
3
96
3
113
33
0
0
66
0.92
3901--4162
106
2.5
102
85
6
321
33
13
7
44
1.73
3901--4182
102
2.7
104
82
9
297
34
12
7
45
1.71
4972--5035
24
2.7
24
90
0
92
29
23
23
23
1.99
7991--8021
14
2.2
14
94
0
53
0
29
0
70
0.87
8040--8074
6
5.8
6
90
9
54
0
14
0
85
0.59
14925--14951
14
1.9
14
100
0
54
0
33
0
66
0.92

Tables:   1

The End!