Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007440.1 Corchorus capsularis cultivar CVL-1 contig07461, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49075

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
751--806
16
3.5
16
80
7
60
14
19
30
35
1.91
716--806
31
2.9
30
78
15
87
13
16
31
38
1.87
2530--2566
13
2.8
13
87
4
56
37
2
13
45
1.58
3566--3610
21
2.1
21
87
0
63
64
8
0
26
1.23
8041--8073
14
2.4
14
90
10
50
0
18
0
81
0.68
19204--19260
21
3.0
21
70
21
61
40
10
29
19
1.85
37042--37076
16
2.1
17
89
5
54
62
0
2
34
1.10
43016--43040
13
1.9
13
100
0
50
56
0
0
44
0.99
44857--44931
29
2.6
29
84
2
96
20
25
16
38
1.92
45070--45146
29
2.7
29
85
4
111
38
18
27
15
1.91
48224--48315
33
2.8
33
83
0
130
23
23
19
32
1.97

Tables:   1

The End!