Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007441.1 Corchorus capsularis cultivar CVL-1 contig07462, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34865

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1268--1315
18
2.7
18
76
0
51
2
29
0
68
1.01
2582--2608
2
13.5
2
100
0
54
51
0
0
48
1.00
7559--7620
33
1.9
32
90
6
99
24
3
19
53
1.60
7744--7769
3
8.7
3
100
0
52
69
0
0
30
0.89
7861--7920
22
2.7
22
76
5
59
50
5
1
43
1.34
8679--8752
38
2.0
37
94
2
130
35
13
13
37
1.84
20747--20971
119
1.9
119
94
1
398
36
13
6
44
1.69
29876--29919
22
2.0
22
100
0
88
68
13
4
13
1.36

Tables:   1

The End!