Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007444.1 Corchorus capsularis cultivar CVL-1 contig07465, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36222

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--34
2
17.0
2
100
0
68
0
50
0
50
1.00
4000--4091
46
2.0
46
91
0
148
20
10
17
51
1.75
13064--13097
2
17.0
2
93
0
59
47
0
2
50
1.16
13300--13335
5
7.0
5
93
6
63
19
0
0
80
0.71
13301--13336
11
3.4
11
96
3
65
16
0
0
83
0.65
19645--19686
17
2.5
17
85
11
52
57
19
2
21
1.52
25063--25939
436
2.0
439
80
6
976
42
14
13
29
1.83
30066--30114
21
2.3
21
100
0
98
32
4
18
44
1.68
30705--30734
15
2.0
15
93
0
51
70
6
10
13
1.34

Tables:   1

The End!