Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007450.1 Corchorus capsularis cultivar CVL-1 contig07471, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53882

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2300--2380
32
2.5
33
80
6
85
32
20
13
33
1.92
4017--4062
22
2.1
22
87
0
65
54
6
4
34
1.46
8542--8575
15
2.2
16
90
10
54
14
14
11
58
1.63
19863--19889
10
2.7
10
100
0
54
44
18
29
7
1.77
22991--23033
17
2.4
18
88
7
61
58
0
23
18
1.40
27877--27955
33
2.5
32
83
6
99
25
41
26
6
1.79
37667--37802
67
2.0
67
100
0
272
55
14
13
16
1.70
37671--37784
36
3.3
36
69
16
123
57
12
13
17
1.66
50883--50924
21
2.0
20
86
4
57
40
11
21
26
1.88
52992--53061
30
2.3
30
90
4
106
22
10
15
51
1.73

Tables:   1

The End!