Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007451.1 Corchorus capsularis cultivar CVL-1 contig07472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25904

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1337--1394
27
2.3
25
85
8
73
18
5
12
63
1.46
1565--4171
331
7.9
331
85
4
3335
36
16
13
33
1.89
1565--4161
669
3.9
656
86
3
3411
36
16
13
33
1.89
6326--8768
332
7.4
329
75
9
1737
36
14
14
34
1.86
8783--10550
331
5.4
328
78
9
1509
36
14
14
34
1.86
13085--13147
29
2.2
29
88
0
90
26
19
6
47
1.73
13200--13274
30
2.5
29
84
4
96
38
18
25
17
1.92
14421--14470
25
2.0
25
100
0
100
56
8
8
28
1.57
15238--15297
5
11.6
5
80
16
61
76
0
18
5
0.96
22239--22280
21
2.0
21
95
0
75
26
4
16
52
1.63

Tables:   1

The End!