Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007454.1 Corchorus capsularis cultivar CVL-1 contig07475, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28933

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--65
32
1.9
31
84
12
81
11
32
45
11
1.76
165--258
32
2.9
32
82
1
98
12
40
36
10
1.78
1194--1227
14
2.4
14
90
9
52
41
8
2
47
1.50
6126--6268
72
2.0
72
91
0
232
36
18
18
27
1.94
6218--6275
30
1.9
30
89
0
89
36
24
17
22
1.95
13412--13445
7
5.0
7
96
3
61
55
14
29
0
1.40
15565--15598
14
2.2
16
90
10
54
23
0
17
58
1.38
15564--15604
16
2.6
16
81
18
50
26
0
14
58
1.37
15915--15959
22
2.0
22
95
0
81
13
6
44
35
1.70

Tables:   1

The End!