Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007455.1 Corchorus capsularis cultivar CVL-1 contig07476, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17240

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4401--4433
2
16.5
2
100
0
66
48
0
0
51
1.00
6467--6502
10
3.5
10
88
7
54
83
5
0
11
0.80
6466--6502
11
3.5
11
88
3
58
83
5
0
10
0.79
7899--8124
124
1.8
124
80
3
276
24
23
26
25
2.00
8266--8293
13
2.2
13
100
0
56
25
0
53
21
1.46
10031--10059
14
2.1
14
100
0
58
20
24
13
41
1.89
10864--10899
14
2.4
16
90
9
58
2
13
2
80
0.93
12154--12215
24
2.6
25
79
5
74
43
1
4
50
1.33
13692--13738
23
2.0
23
84
8
60
29
17
8
44
1.78
15021--15053
17
1.9
17
100
0
66
51
12
0
36
1.39
15214--15655
165
2.7
164
86
3
618
39
16
14
29
1.88
16978--17007
1
30.0
1
100
0
60
100
0
0
0
0.00

Tables:   1

The End!