Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007456.1 Corchorus capsularis cultivar CVL-1 contig07477, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16388

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3531--3573
21
2.0
21
95
0
77
20
30
27
20
1.98
6427--6478
21
2.5
21
81
3
61
19
5
9
65
1.42
8405--8429
6
4.2
6
100
0
50
68
0
16
16
1.22
8774--8803
11
2.7
11
100
0
60
0
40
0
60
0.97
13459--13574
39
3.0
39
98
0
223
34
5
12
47
1.64
16048--16097
21
2.3
22
93
3
84
0
30
42
28
1.56
16143--16267
15
8.5
15
66
21
61
50
1
1
46
1.20
16177--16267
37
2.5
37
78
7
107
50
2
2
45
1.26

Tables:   1

The End!