Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007460.1 Corchorus capsularis cultivar CVL-1 contig07481, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25762

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
464--505
21
2.0
21
90
0
66
21
19
11
47
1.81
465--526
21
3.0
21
83
4
63
22
24
11
41
1.86
495--533
21
2.0
20
85
14
55
23
33
10
33
1.88
1551--1592
21
2.0
21
90
0
66
21
21
9
47
1.79
1582--1620
21
2.0
20
85
14
55
23
33
10
33
1.88
5196--5236
22
1.9
21
85
5
55
21
29
29
19
1.98
8691--8718
2
14.0
2
100
0
56
50
0
0
50
1.00
10562--10593
16
2.0
16
100
0
64
68
25
0
6
1.12
11871--12082
110
1.9
110
100
0
424
30
7
24
37
1.83
16302--16327
7
3.7
7
100
0
52
26
46
11
15
1.80
22656--22719
21
3.0
21
82
8
78
32
9
15
42
1.79
23653--23845
41
4.7
41
81
7
214
37
16
13
32
1.88
24948--24981
10
3.5
10
84
8
52
79
2
0
17
0.86

Tables:   1

The End!