Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007465.1 Corchorus capsularis cultivar CVL-1 contig07486, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57499

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2511--2549
11
3.7
11
83
10
55
17
0
0
82
0.68
10189--10243
20
2.7
21
91
8
87
9
29
34
27
1.87
11000--11036
6
6.3
6
90
3
58
32
0
16
51
1.45
11373--11410
17
2.3
17
86
4
51
44
7
2
44
1.47
16630--16660
6
5.3
6
96
3
55
35
0
12
51
1.40
17670--17739
35
2.0
35
100
0
140
25
28
11
34
1.91
17926--17982
24
2.3
24
77
19
64
38
0
22
38
1.55
27202--27256
26
2.1
26
82
0
65
20
16
21
41
1.90
29714--29775
32
1.9
33
86
3
90
40
4
11
43
1.62
30308--30920
35
17.6
35
86
5
726
37
9
17
35
1.83
30435--30503
31
2.4
27
78
17
84
39
10
15
34
1.82
30309--30920
136
4.4
136
86
5
742
37
9
17
35
1.83
38717--38765
21
2.3
21
85
0
62
28
28
32
10
1.90

Tables:   1

The End!