Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007467.1 Corchorus capsularis cultivar CVL-1 contig07488, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32371

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--61
2
30.5
2
100
0
122
0
49
0
50
1.00
61--85
2
12.5
2
100
0
50
48
0
0
52
1.00
2620--2650
16
1.9
16
93
0
53
48
35
6
9
1.62
4275--4401
29
4.4
28
75
7
114
44
20
25
9
1.81
14158--14321
22
7.5
22
73
15
103
41
9
14
34
1.79
14216--14322
44
2.4
45
84
6
130
38
7
13
41
1.72
14553--14583
15
2.1
15
93
0
53
58
12
6
22
1.58
17931--17956
13
2.0
13
100
0
52
53
0
0
46
1.00
25330--25433
51
2.0
51
98
0
199
21
15
33
29
1.94
25430--25492
31
2.0
31
100
0
126
19
14
41
25
1.89

Tables:   1

The End!