Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007475.1 Corchorus capsularis cultivar CVL-1 contig07496, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44183

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5932--6164
112
2.1
112
98
1
452
27
20
15
36
1.93
6904--7004
32
3.1
32
84
5
114
13
34
41
9
1.78
7701--7727
7
3.9
7
100
0
54
14
44
0
40
1.46
8567--8597
16
1.9
16
100
0
62
29
6
6
58
1.48
20458--20568
46
2.4
46
95
0
195
17
21
15
45
1.84
38362--38471
53
2.0
56
94
5
199
38
3
19
39
1.69
40193--40227
11
3.2
11
83
0
52
77
17
5
0
0.96

Tables:   1

The End!