Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007481.1 Corchorus capsularis cultivar CVL-1 contig07502, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31023

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1160--1193
8
4.1
8
85
7
50
23
2
14
58
1.50
4552--8120
159
22.6
158
80
4
3482
26
22
21
29
1.99
4540--8120
477
7.6
476
84
4
4000
26
22
21
29
1.99
7820--8120
150
2.0
149
96
0
548
26
21
21
30
1.99
10584--10681
49
2.0
49
93
0
169
14
21
20
43
1.87
10959--11040
40
2.0
40
92
0
137
24
0
21
53
1.46
11589--11896
152
2.0
153
87
5
444
21
16
20
41
1.90
12136--12216
40
2.0
40
95
0
144
25
0
20
53
1.46
16286--16317
4
7.8
4
93
6
55
75
25
0
0
0.81
18134--18290
81
1.9
81
91
5
255
47
10
5
35
1.62
25573--26317
370
2.0
370
92
1
1224
30
17
17
33
1.94
26936--26973
18
2.1
19
90
5
60
28
13
39
18
1.88
28495--28532
18
2.1
19
90
5
60
28
13
39
18
1.88
29960--30022
30
2.1
30
85
5
83
30
17
33
19
1.95
30066--30103
18
2.1
19
90
5
60
28
13
39
18
1.88

Tables:   1

The End!