Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007485.1 Corchorus capsularis cultivar CVL-1 contig07506, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17113

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
889--3450
329
7.8
329
83
4
2844
33
14
16
35
1.89
3459--3503
21
2.1
22
84
12
58
15
37
8
37
1.79
9531--9576
2
22.5
2
79
20
51
43
4
2
50
1.34
10284--10317
17
2.0
17
88
0
50
41
14
11
32
1.82
12084--12110
2
13.5
2
100
0
54
48
0
51
0
1.00
13032--13109
40
2.1
38
86
11
108
52
5
8
33
1.55

Tables:   1

The End!