Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007492.1 Corchorus capsularis cultivar CVL-1 contig07513, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30739

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1066--1095
13
2.3
13
100
0
60
33
16
36
13
1.88
5389--5487
32
3.2
31
80
8
112
16
9
35
39
1.80
5674--5720
16
2.9
16
78
6
51
12
8
23
55
1.64
5684--5719
15
2.3
16
90
4
56
13
11
16
58
1.63
11480--11522
20
2.0
22
91
8
72
37
25
9
27
1.87
16495--16568
32
2.3
33
86
6
107
36
6
18
37
1.78
24535--24591
28
2.0
28
96
0
105
43
26
14
15
1.85
29064--29166
57
1.9
53
86
13
149
44
17
2
34
1.64
29284--29308
2
12.5
2
100
0
50
48
0
0
52
1.00
30194--30236
21
2.0
22
86
4
61
18
37
9
34
1.83

Tables:   1

The End!