Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007493.1 Corchorus capsularis cultivar CVL-1 contig07514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20154

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
929--1004
10
7.4
10
76
20
77
57
2
0
39
1.12
934--1004
21
3.4
21
78
19
78
57
2
0
39
1.13
929--1004
31
2.5
29
85
12
91
57
2
0
39
1.12
1192--1238
21
2.3
20
81
3
58
53
8
4
34
1.51
3396--3468
36
2.0
36
97
0
137
49
27
12
10
1.74
5908--5933
8
3.2
8
100
0
52
34
0
15
50
1.45
8894--8989
37
2.6
37
98
1
185
42
9
15
32
1.79
11362--11434
31
2.3
31
81
6
85
36
8
19
35
1.81
11381--11462
31
2.8
29
78
12
87
35
10
23
30
1.89
11381--11465
29
2.8
29
77
19
77
35
10
23
30
1.89
12910--12986
32
2.4
32
77
10
86
36
10
25
27
1.89

Tables:   1

The End!