Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007500.1 Corchorus capsularis cultivar CVL-1 contig07521, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24541

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8856--8889
7
4.9
7
88
0
50
70
14
2
11
1.27
13142--13178
19
2.0
18
89
5
56
40
8
21
29
1.82
15957--16531
85
6.8
85
92
2
892
25
9
25
40
1.85
20344--20378
15
2.2
16
90
5
54
14
5
0
80
0.89
20573--20688
61
1.9
61
89
0
178
41
0
21
37
1.53
22821--22894
27
2.7
27
82
0
85
16
12
24
47
1.80
23219--23246
14
2.0
14
100
0
56
21
14
14
50
1.78
23433--23470
20
2.0
20
89
5
60
31
10
18
39
1.85
24015--24053
19
2.1
19
100
0
78
38
5
25
30
1.78
24349--24375
12
2.2
12
100
0
54
33
37
0
29
1.58

Tables:   1

The End!