Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007504.1 Corchorus capsularis cultivar CVL-1 contig07525, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30127

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2056--2195
18
7.8
18
82
0
163
11
19
39
30
1.87
2096--2210
36
3.2
36
82
4
151
11
17
40
30
1.84
13753--13778
10
2.6
10
100
0
52
30
7
23
38
1.83
20743--20787
18
2.6
16
83
13
54
82
0
11
6
0.84
21065--21102
20
2.0
20
89
5
60
39
5
21
34
1.76
23582--23606
13
1.9
13
100
0
50
52
0
24
24
1.48
24877--24965
44
2.0
44
93
2
153
35
6
19
38
1.78

Tables:   1

The End!