Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007506.1 Corchorus capsularis cultivar CVL-1 contig07527, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9134

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
848--978
40
3.3
40
77
4
140
52
10
14
22
1.72
848--1005
80
2.0
80
79
9
171
51
12
13
22
1.74
1057--1252
11
17.6
11
77
5
180
46
8
19
25
1.78
1052--1262
33
6.3
33
81
6
203
47
8
19
24
1.77
1254--1659
35
11.6
34
81
7
456
43
10
20
25
1.84
1255--1659
174
2.3
177
89
3
629
43
10
20
25
1.84
2588--2722
69
2.0
69
89
2
209
47
13
15
23
1.81
7526--7563
2
19.0
2
100
0
76
50
0
0
50
1.00
8465--8541
22
3.5
22
79
8
77
40
9
10
40
1.71

Tables:   1

The End!