Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007514.1 Corchorus capsularis cultivar CVL-1 contig07535, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38830

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3130--3195
30
2.2
30
91
0
105
9
27
42
21
1.83
4244--5183
475
2.0
475
97
0
1781
29
20
23
27
1.98
11696--11740
20
2.2
20
84
4
54
66
8
8
15
1.43
13882--13920
21
1.9
19
85
10
51
43
20
10
25
1.83
16912--16956
20
2.2
20
84
4
54
66
8
8
15
1.43
22665--22697
11
3.0
11
90
0
57
51
18
0
30
1.46
38403--38504
31
3.4
29
75
15
100
36
14
19
29
1.92
38404--38566
60
2.7
60
92
0
254
34
17
20
27
1.95
38435--38544
29
3.7
29
72
13
89
30
17
21
30
1.96
38464--38568
31
3.5
31
74
10
117
34
20
20
24
1.96
38598--38727
31
4.3
30
77
13
140
26
20
14
39
1.91
38657--38758
29
3.4
29
72
15
100
29
21
16
32
1.95
38626--38789
60
2.7
60
88
3
233
28
19
17
35
1.94

Tables:   1

The End!