Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007517.1 Corchorus capsularis cultivar CVL-1 contig07538, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16249

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
864--1054
55
3.6
55
87
8
286
49
7
17
24
1.73
864--1023
49
3.2
49
91
7
234
49
7
18
25
1.73
864--1054
104
1.8
104
93
0
328
49
7
17
24
1.73
998--1144
71
2.1
71
89
0
222
49
6
17
26
1.71
1010--1131
34
3.5
34
73
14
122
50
7
14
27
1.70
1459--1491
17
1.9
17
88
11
50
54
0
21
24
1.45
1551--1613
30
2.1
31
79
8
76
55
1
22
20
1.52
1451--1694
27
9.2
26
72
17
155
55
3
22
19
1.57
5152--5188
19
2.0
18
89
5
56
40
8
21
29
1.82
14953--15017
25
2.7
23
73
15
60
15
7
12
64
1.48

Tables:   1

The End!