Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007520.1 Corchorus capsularis cultivar CVL-1 contig07541, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21755

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1963--1993
16
1.9
16
93
0
53
54
25
3
16
1.56
8643--8678
17
2.1
17
100
0
72
11
11
33
44
1.75
8841--8866
7
3.7
7
100
0
52
0
42
0
57
0.98
9064--9123
18
3.2
18
80
13
75
51
18
8
21
1.72
13284--13336
22
2.4
22
80
3
61
47
3
22
26
1.68
14113--14142
15
1.9
16
93
6
53
46
6
6
40
1.56
14205--14243
3
13.0
3
100
0
78
66
0
0
33
0.92
16597--16649
23
2.4
22
74
3
52
58
0
11
30
1.33
16940--16989
3
16.7
3
100
0
100
0
0
32
68
0.90

Tables:   1

The End!