Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007523.1 Corchorus capsularis cultivar CVL-1 contig07544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3899

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
190--238
13
3.5
15
76
15
52
51
0
0
48
1.00
213--264
24
2.1
24
82
10
61
50
1
0
48
1.12
561--636
16
4.8
16
79
4
82
10
19
32
36
1.86
523--636
32
3.6
31
79
8
106
9
19
33
37
1.84
526--639
48
2.4
46
84
5
138
9
18
34
37
1.84
863--944
42
2.0
42
95
0
146
35
4
19
40
1.73
1406--1495
45
2.0
45
95
0
162
33
20
22
24
1.97

Tables:   1

The End!