Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007525.1 Corchorus capsularis cultivar CVL-1 contig07546, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28438

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8060--8424
182
2.0
182
95
0
649
25
14
13
47
1.80
22529--22610
43
1.9
43
92
0
137
41
19
6
32
1.76
22517--22609
22
4.3
23
81
10
106
41
21
6
30
1.78
22529--22651
22
5.6
22
71
11
74
40
15
8
34
1.79
22956--23004
22
2.2
22
81
0
62
34
8
12
44
1.71
22988--23089
22
4.6
23
77
7
104
35
10
11
42
1.77
22966--23089
44
2.8
44
78
4
133
34
10
12
41
1.78

Tables:   1

The End!