Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007526.1 Corchorus capsularis cultivar CVL-1 contig07547, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20306

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62--111
7
7.4
7
90
4
77
70
0
30
0
0.88
55--111
19
2.9
20
84
10
82
70
0
29
0
0.88
55--111
26
2.2
26
93
0
96
70
0
29
0
0.88
1078--1132
13
4.4
13
80
15
62
30
1
7
60
1.35
7067--7163
40
2.4
40
100
0
194
30
7
15
46
1.73
11665--11970
33
9.5
32
74
14
224
14
35
33
16
1.89
11665--11969
66
4.7
66
75
17
259
14
35
33
16
1.89
11665--12026
125
2.8
124
86
6
458
14
34
34
16
1.89
12280--12320
20
2.0
20
90
0
64
34
7
36
21
1.82
15902--15970
36
1.9
36
94
5
122
33
14
13
39
1.85
16801--16832
2
16.5
2
93
6
57
50
0
0
50
1.00
17649--17676
14
2.0
14
100
0
56
42
0
0
57
0.99
19166--19218
20
2.6
20
80
19
65
28
13
5
52
1.62

Tables:   1

The End!