Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007529.1 Corchorus capsularis cultivar CVL-1 contig07550, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12833

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3118--3409
113
2.6
113
91
0
449
25
24
17
32
1.97
4262--4553
113
2.6
113
88
0
413
25
24
16
33
1.95
5514--5540
6
4.5
6
100
0
54
29
0
14
55
1.40
8225--8299
28
2.7
27
85
4
96
17
12
24
46
1.81
8731--8775
23
2.0
23
100
0
90
17
17
22
42
1.89
9894--9942
16
3.1
16
85
2
73
32
8
24
34
1.85
10640--10742
49
2.1
49
85
7
138
39
5
19
34
1.76
10663--10768
49
2.2
49
85
0
140
40
6
19
33
1.78
11637--12007
55
6.7
54
92
3
589
47
8
19
24
1.76
11957--12093
71
1.9
72
87
1
204
45
7
18
27
1.76
12038--12099
16
3.8
15
76
17
61
48
8
17
25
1.75
12363--12455
22
4.2
23
75
15
81
54
6
17
21
1.64

Tables:   1

The End!