Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007542.1 Corchorus capsularis cultivar CVL-1 contig07563, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26502

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2539--2705
31
5.5
31
70
14
111
17
25
21
35
1.95
2592--2639
25
1.9
25
86
0
69
18
22
22
35
1.96
4694--4740
20
2.3
20
77
0
58
31
0
0
68
0.90
5056--5082
11
2.5
11
100
0
54
59
14
7
18
1.58
8934--9088
80
2.0
76
94
5
274
37
11
14
36
1.82
14189--14263
28
2.7
28
100
0
150
29
14
13
42
1.84
15794--15828
16
2.2
16
89
0
52
37
14
14
34
1.86
20121--20152
15
2.1
15
100
0
64
40
31
6
21
1.78
21720--21768
22
2.1
24
92
7
84
63
4
4
28
1.31

Tables:   1

The End!