Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007543.1 Corchorus capsularis cultivar CVL-1 contig07564, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20425

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
738--806
31
2.2
31
85
10
88
42
1
2
53
1.24
1563--1593
2
15.5
2
93
0
53
48
0
3
48
1.17
7961--8088
66
1.9
66
98
0
247
21
17
17
42
1.89
10992--11022
15
2.0
16
93
6
55
51
6
0
41
1.27
14788--14821
6
5.7
6
96
0
50
0
44
14
41
1.45
14782--14821
12
3.3
12
89
0
53
0
42
12
45
1.42
16646--16685
15
2.7
15
84
7
55
55
0
42
2
1.13
17757--17788
15
2.1
16
94
5
57
6
31
0
62
1.20

Tables:   1

The End!