Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007544.1 Corchorus capsularis cultivar CVL-1 contig07565, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7740

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
811--853
22
2.0
22
90
0
68
53
16
13
16
1.73
1439--1464
12
2.2
12
100
0
52
42
23
19
15
1.89
1496--1545
24
2.1
24
96
0
91
34
24
6
36
1.80
1688--1713
12
2.2
12
100
0
52
76
0
23
0
0.78
1852--1889
18
2.1
18
100
0
76
34
23
15
26
1.95
5104--5145
20
2.1
20
86
0
57
19
23
14
42
1.87

Tables:   1

The End!