Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007549.1 Corchorus capsularis cultivar CVL-1 contig07570, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35773

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
396--448
24
2.2
24
96
0
97
5
30
24
39
1.78
6053--6096
1
44.0
1
100
0
88
0
0
0
100
0.00
8315--8480
72
2.3
72
84
3
217
33
16
21
28
1.95
15089--15116
3
9.3
3
100
0
56
67
0
0
32
0.91
17020--17178
72
2.2
73
87
4
234
30
13
25
30
1.94
29897--29977
31
2.6
31
94
2
135
19
11
30
38
1.87
30179--30260
26
3.2
26
65
25
73
50
9
4
35
1.57
30181--30285
52
2.0
52
98
0
201
48
14
5
31
1.67
30193--30277
26
3.3
26
67
23
79
49
14
5
30
1.66
35087--35495
203
2.0
201
89
1
631
26
18
19
36
1.94

Tables:   1

The End!