Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007550.1 Corchorus capsularis cultivar CVL-1 contig07571, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30667

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
399--446
22
2.3
20
86
10
62
39
25
16
18
1.91
419--516
31
3.2
31
86
0
115
34
26
20
18
1.95
366--468
53
1.9
53
86
0
143
36
26
19
17
1.94
1678--1719
21
2.0
21
100
0
84
33
4
19
42
1.72
7593--7645
16
3.4
16
72
15
56
54
0
28
16
1.43
7593--7656
31
2.1
31
96
0
119
54
0
29
15
1.41
23326--23366
20
2.0
20
90
0
64
43
7
12
36
1.70
23347--29634
332
19.0
332
81
6
6858
37
16
14
31
1.89
29404--29871
237
2.0
237
86
3
665
38
16
8
36
1.79
29061--30203
570
2.0
570
88
3
1699
38
16
11
32
1.85

Tables:   1

The End!