Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007558.1 Corchorus capsularis cultivar CVL-1 contig07579, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11874

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2503--2531
2
14.5
2
100
0
58
51
0
0
48
1.00
2531--2562
2
16.0
2
93
0
55
50
3
46
0
1.17
4998--5043
24
1.9
24
82
8
58
47
21
15
15
1.81
6083--6130
22
2.2
22
82
14
55
10
33
2
54
1.46
6596--6623
14
2.0
14
100
0
56
50
21
7
21
1.72
9101--9125
10
2.5
10
100
0
50
64
12
8
16
1.49

Tables:   1

The End!