Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007559.1 Corchorus capsularis cultivar CVL-1 contig07580, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13472

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10681--10761
7
11.4
7
76
7
74
62
2
17
17
1.43
10685--10776
7
12.9
7
74
8
60
58
2
20
18
1.49
10681--10776
36
2.7
36
88
1
140
60
2
19
17
1.46
10681--10792
36
3.1
36
82
8
131
59
1
19
18
1.46
10789--10874
25
3.1
28
83
11
115
55
2
17
24
1.53
10767--10903
53
2.7
52
79
14
151
56
1
18
23
1.50
10899--10960
33
1.9
33
90
3
99
59
3
16
20
1.50
10932--10989
26
2.2
26
82
11
66
63
3
15
17
1.44
10930--11090
25
5.8
27
74
19
120
60
1
19
18
1.42
10930--11090
83
1.9
84
84
12
217
60
1
19
18
1.42
12863--12966
53
2.0
53
96
0
190
28
25
17
28
1.97

Tables:   1

The End!