Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007561.1 Corchorus capsularis cultivar CVL-1 contig07582, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15077

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1823--1891
24
2.9
24
78
8
86
23
5
27
43
1.76
4392--4432
21
2.0
21
95
0
73
41
41
7
9
1.66
7226--7304
30
2.7
30
98
2
151
6
29
12
51
1.64
12952--13009
30
1.9
30
89
6
91
58
3
13
24
1.51
13269--13426
73
2.1
75
80
12
184
29
10
19
39
1.86
14261--14417
73
2.1
74
90
2
244
21
26
10
42
1.84

Tables:   1

The End!