Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007564.1 Corchorus capsularis cultivar CVL-1 contig07585, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22525

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14024--14054
2
15.5
2
100
0
62
51
0
0
48
1.00
20639--20691
2
27.0
2
81
11
56
50
3
1
43
1.30
21546--21607
31
2.0
31
96
0
115
30
19
27
22
1.98
22334--22454
33
3.7
33
91
4
190
19
39
29
11
1.86
22399--22449
16
3.1
16
68
15
50
19
39
31
9
1.84
22340--22503
33
5.0
32
86
5
127
17
40
31
10
1.84
22335--22507
66
2.6
66
81
7
183
16
41
30
11
1.84
22439--22519
32
2.5
33
85
2
101
9
39
38
12
1.76

Tables:   1

The End!