Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007578.1 Corchorus capsularis cultivar CVL-1 contig07599, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7373

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
892--947
19
2.7
21
73
21
55
44
3
17
33
1.66
898--935
19
2.1
18
90
5
58
44
2
21
31
1.66
2309--2338
15
2.0
15
93
0
51
13
10
6
70
1.34
2584--2626
19
2.3
19
84
8
61
65
6
9
18
1.44
5194--5232
21
1.9
19
85
10
51
25
10
20
43
1.83
6637--6692
19
2.7
21
73
21
55
44
3
17
33
1.66
6643--6680
19
2.1
18
90
5
58
44
2
21
31
1.66

Tables:   1

The End!