Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007583.1 Corchorus capsularis cultivar CVL-1 contig07604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12143

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7429--7486
12
4.8
12
84
2
80
77
0
22
0
0.77
7435--7482
9
5.3
9
82
7
53
77
0
22
0
0.78
7429--7485
18
3.4
15
74
23
51
78
0
21
0
0.74
8038--8080
13
3.3
13
86
0
59
44
6
11
37
1.68
8348--8401
11
4.7
11
84
15
74
75
12
0
11
1.04
8348--8415
18
3.7
18
75
13
68
73
13
0
13
1.10
8378--8414
8
4.4
8
93
6
56
78
10
0
10
0.97
8350--8442
29
3.2
30
78
18
99
76
10
0
12
1.02
8368--8409
10
4.3
10
85
14
61
80
9
0
9
0.89
8387--8443
16
3.2
17
73
21
55
77
8
0
14
0.99
8362--8444
21
4.2
20
75
13
75
75
9
0
14
1.03
8389--8452
29
2.2
28
78
13
67
73
9
1
15
1.16
8768--8838
8
8.4
8
85
14
90
73
0
14
12
1.11
8768--8838
26
2.8
24
80
19
90
73
0
14
12
1.11
8768--8829
18
3.5
18
95
2
108
70
0
14
14
1.16

Tables:   1

The End!